Selected publications are listed. Please see Google Scholar for more.
ZEPPI: Proteome-scale sequence-based evaluation of protein–protein interaction models

Haiqing Zhao, Donald Petrey, Diana Murraya, Barry Honig, 2024, Proceedings of the National Academy of Sciences
The role of cryptic ancestral symmetry in histone folding mechanisms across Eukarya and Archaea

Haiqing Zhao, Hao Wu, Alex Guseman, Dulith Abeykoon, Christina M. Camara, Yamini Dalal, David Fushman, Garegin A. Papoian, 2024, PLOS Computational Biology
PrePPI: A Structure Informed Proteome-wide Database of Protein–Protein Interactions

Donald Petrey, Haiqing Zhao, Stephen J Trudeau, Diana Murray, Barry Honig, 2023, Journal of Molecular Biology
Specific Regulation of BACH1 by the Hotspot Mutant p53(R175H) Reveals A Distinct Gain-of-function Mechanism

Zhenyi Su, Ning Kon, Jingjie Yi, Haiqing Zhao, Wanwei Zhang, Qiaosi Tang, Huan Li, Hiroki Kobayashi5, Zhiming Li, Shoufu Duan, Yanqing Liu, Kenneth P. Olive, Zhiguo Zhang, Barry Honig, James J. Manfredi, Anil K. Rustgi, Wei Gu, 2023, Nature Cancer
Structural Basis of Antibody Conformation and Stability Modulation by Framework Somatic Hypermutation

Zizhang Sheng, Jude S. Bimela, Phinikoula S. Katsamba, Saurabh D. Patel, Yicheng Guo, Haiqing Zhao, Youzhong Guo, Peter D. Kwong, Lawrence Shapiro, 2022, Frontiers in Immunology
The Oligomerization Landscape of Histones

Haiqing Zhao, David Winogradoff, Yamini Dalal, Garegin A. Papoian, 2019, Biophysical Journal
Promiscuous Histone Mis-Assembly Is Actively Prevented by Chaperones

Haiqing Zhao, Donald Petrey, Minh Bui, Yamini Dalal, Garegin A. Papoian, 2016, Journal of the American Chemical Society
Shearing of the CENP-A Dimerization Interface Mediates Plasticity in the octameric Centromeric Nucleosome

David Winogradoff, Haiqing Zhao, Yamini Dalal, Garegin A. Papoian, 2015, Scientific Reports
Chromatin Dynamics in Vivo: A Game of Musical Chairs

Daniël P. Melters, Jonathan Nye, Haiqing Zhao, and Yamini Dalal, 2015, Genes
Nanoscale Tail Aggregation in Ionic Liquids: Roles of Electrostatic and van der Waals Interactions

Haiqing Zhao, Rui Shi, Yanting Wang, 2011, Communications in Theoretical Physics